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Monday, September 25, 2017

GSE99899 Small RNA (sRNA) RNA-seq analysis of BORIS/CTCFL knockdown in K562 cell line

Contributors : Evgeny Teplyakov ; Qiongfang Wu ; Jian Liu ; AbdelHalim Boukaba ; Alexander Strunnikov
Series Type : Non-coding RNA profiling by high throughput sequencing
Organism : Homo sapiens

The study involved transcriptome analysis using RNA-seq knockdown of BORIS/CTCFL gene expression in K652 cancer cell line using inducible shRNA.
The K562 cell line is the only cancer cell line that is known to be dependent on BORIS for proliferation and self-renewal of stemness.
The goal of the study was to investigate the early/immediate small RNA transcriptional response to BORIS downregulation (over 10-fold reduction in protein level) using an inducible shRNA.



from # All Medicine by Alexandros G. Sfakianakis via alkiviadis.1961 on Inoreader http://ift.tt/2fjr7nT

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